Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920345.1_cds_XP_016469499.1_62040
CDS Infomation

[gene=LOC107791868] [db_xref=GeneID:107791868] [protein=vacuolar protein-sorting protein bro1-like] [protein_id=XP_016469499.1] [location=join(46127..46358,48819..48931,49033..49404,50141..50879,51192..51262)] [gbkey=CDS]
Sequence

ATGGGCAAAGTAGAGGATGAACATCAATTACCAATATCAACAGTAGGTGCAAATGGTACA
GACCAAAATGTAGAGAATAATAGTTGCCGCAGCAGATTCAGTGGGTTTGTGAAGTTTAGA
TGTGTATTTGCTTTGCTGTTTGGTGGAGCTGTTTTGCTTTCTGCTATATTTTTGCTGCCT
TTTTTTCACACTGGAGATCTTGGGGATCTAGATCTAGACCCCAAATTTAGAGGTCATGAC
ATAGTAGCCAGTTTCATGCTTGAGAAGCCAGCTTCTTTGATGGAGGATTATACCTTGCAA
CTTGAAGATGATATTTTTGATGAAATAAGTGTTTCCAACACTAAAGTGGAAATAATATCA
TTAGAAAATATAACTGGATCAAACATAACAAGGGTTGTCTTCGCTGTTGATTCTGATGTG
AAAAATATGAGGATTTCTCCAACTGCTCTGAGTCTAGTCAGATCCGAATTTGAAACTGTA
ATTACTCACCCATCATTTCTGCACCTGACGGCATCTTTGTTCGGGGATCCTTTTTCTTTC
GATGTGCTGAAACTCAGAGGAGGGATTACAGTGATCCCTAAACAAATTGGATTCCTCATG
CAGAATGTGCAGATCCGATTCAACTTCACATTGAACTCCTCCATCGATGAAATTCAAGAT
AAATTTGATGAATTAACAAGCCAGCTGAAATCAGGGGTACACCTTGCATCATACGAGAAC
TTGTATATCAAGTTGACTAATACAAGAGGCTCGACGGTGAATCCTCCCACTATTGTTCAG
TGTCAAGTTCTTTTAGCAGTTGGGATAAATCCTTCTAATTCTAGGTTGAAGCAGTTGGCT
CAGACCATTGGTTCTAATTCTAAAAACCTTGGCCTTAATAACACCGTATTTGGGAGGGTT
AAACAAGTTAGCCTGTCTTCTATTTTACAACATTCTCTTGGTAGTCCTTCACCTTCTCCG
GCTCCTCAACCCTATCACCCTCAACACCATCACCACCACAGTCGCCACCACCACCGCCAA
GGCTCGAATGTTGCTCCCGCAATTTCACCTGCTCCGAGGGCTGAGAAAAGGGGATCAGTT
AGCAGGAAAGTTTCACCAATATTGGCACCTGTGCCATCGTCTGCACCAGTGGTTGCACCT
GCCCCTATACATTCAACTCACAAAGGTCATGTGGCGAAACCTCCTTGTCATTTCGAGAGA
TTCCCAAGGAAGGCGACTAGTCATCCTCCTGTACTACCGCCTATTAGGTCACCAGTCCCT
GCACCTCATATTGCTCCCTCTCCACCACAGAAAATGCATGCTCCAACACCAGTCCCGCAT
GAACTCTCTGCGTTGAGCCCATTGCCCTCTGTTGTGTATGCTCACACTCAGCCTCCTCCA
ATGACACCTCCAATGACACCTTCAGTTGCAGAGCCTCCTCACAGAATACCTTCAGGTTCA
AAATCCCCATCGTCATCTTCTACAGGGATTTTTTCGTCAAACTTGTGGGCTCTCTCGCTG
TTTCTACTTCTTGTACCACGTTTATAG

Peptide Sequence

PEP ID

XP_016469499.1
PEP Infomation

PREDICTED: vacuolar protein-sorting protein bro1-like [Nicotiana tabacum]
Sequence

MGKVEDEHQLPISTVGANGTDQNVENNSCRSRFSGFVKFRCVFALLFGGAVLLSAIFLLP
FFHTGDLGDLDLDPKFRGHDIVASFMLEKPASLMEDYTLQLEDDIFDEISVSNTKVEIIS
LENITGSNITRVVFAVDSDVKNMRISPTALSLVRSEFETVITHPSFLHLTASLFGDPFSF
DVLKLRGGITVIPKQIGFLMQNVQIRFNFTLNSSIDEIQDKFDELTSQLKSGVHLASYEN
LYIKLTNTRGSTVNPPTIVQCQVLLAVGINPSNSRLKQLAQTIGSNSKNLGLNNTVFGRV
KQVSLSSILQHSLGSPSPSPAPQPYHPQHHHHHSRHHHRQGSNVAPAISPAPRAEKRGSV
SRKVSPILAPVPSSAPVVAPAPIHSTHKGHVAKPPCHFERFPRKATSHPPVLPPIRSPVP
APHIAPSPPQKMHAPTPVPHELSALSPLPSVVYAHTQPPPMTPPMTPSVAEPPHRIPSGS
KSPSSSSTGIFSSNLWALSLFLLLVPRL

Transcript Sequence

Gene sequence data has not been registered.